Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821459.1_cds_XP_016500773.1_14572
CDS Infomation

[gene=LOC107819195] [db_xref=GeneID:107819195] [protein=homeobox-leucine zipper protein HOX11-like] [protein_id=XP_016500773.1] [location=join(13622..13994,14429..14772,14885..14964,15347..15740)] [gbkey=CDS]
Sequence

ATGGAGCTTGGATTAAGCTTAGGAGATACTAATACTGCTGCAACTACTAGAACGACAGCA
GCAGCTTCTTCAAAATCATTTTTCTTGTCAAAGAACAATATTACTTCTTCTTCTTCTGAT
CATCAGAACCATAGTAGTAAGAAGAAGAGAAAGGGTATAGGGTTTTGCATGGCTTTAGGA
ATTAACTCATCAAATGGAAAAGTTCAAGAACAACATGAGGATGATGAAGCAGAAAAATCC
AATGGTGATGATGATGAAGATGATGAGCATACATCCGAAGAAGGGAATACACCAGTTCAG
CTTGATCTTCTCCCTCTTGTTCCTGTTCCTCGCCGTAATCTTCCTCAATCCACCCATTGG
TCTTCTGATAATGGGAGTTCTGAGAATGGTTCGTCCGGTAACGGGGGGCTGCCGGCGGCG
AGGGGGTTCGACGTGAACAGGCTTCCGGCGGCAGGTACGGAAGAAGTTTCATCTCCAAAT
AGTATAGCGTCGTCGTTTCGGATGGATTTTGGCCTTTTTAGGTCTGCTAATATTATTGGG
AATAAACGGAACTCGGACTCCGGCGGAGGAAACGACGGCGGTGAACCGGAAAGAGCATCG
TCAAGAGCAAGTGATGAAGATGAAAATGGTGTTAATACTCGGAAAAAGCTTAGGTTGTCA
AAAGAACAATCAGCTTATCTTGAAGAAAGTTTCAAAGAACACCACACTCTTAATCCTAAG
CAAAAGCTGGCACTTGCTAAACAGCTAAATCTAAGGCCAAGACAAGTTGAAGTCTGGTTT
CAGAATAGAAGAGCAAGGACTAAGTTGAAGCAAACTGAAGTGGATTGTGAGTATTTGAAG
AGATGTTGTGAGACACTAACTGAAGAAAACAGAAGGCTACACAAAGAACTTCAAGAATTG
AGAGCTTTAAAGAGTTCTAATCCATTTTACATGCAACTTCCGGCCACCACTTTAACTATG
TGTCCATCTTGTGAAAGGGTGGCTACCACCACCTCTACCGCTCCTCCCACCACCACCGCC
GGCACCACCACTTCCAAAGCTCCAACCCCTATCGCCACCGCCACCGCAACCGCCACTACT
AGTGACTCTATTCCTAAAGCTATTCCATTTCTTAATTCTAGACCAAGATTTTTCCCATTT
AATACCACCACTAATAATCCCAACCATCCCCATCAATCTGCAGCCTCGTAA

Peptide Sequence

PEP ID

XP_016500773.1
PEP Infomation

PREDICTED: homeobox-leucine zipper protein HOX11-like [Nicotiana tabacum]
Sequence

MELGLSLGDTNTAATTRTTAAASSKSFFLSKNNITSSSSDHQNHSSKKKRKGIGFCMALG
INSSNGKVQEQHEDDEAEKSNGDDDEDDEHTSEEGNTPVQLDLLPLVPVPRRNLPQSTHW
SSDNGSSENGSSGNGGLPAARGFDVNRLPAAGTEEVSSPNSIASSFRMDFGLFRSANIIG
NKRNSDSGGGNDGGEPERASSRASDEDENGVNTRKKLRLSKEQSAYLEESFKEHHTLNPK
QKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQEL
RALKSSNPFYMQLPATTLTMCPSCERVATTTSTAPPTTTAGTTTSKAPTPIATATATATT
SDSIPKAIPFLNSRPRFFPFNTTTNNPNHPHQSAAS

Transcript Sequence

Gene sequence data has not been registered.